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riboPOOL, siPOOL 사용 논문

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▒ rRNA Depletion [riboPOOL] 사용 논문


Rewiring of RNA methylation by the oncometabolite fumarate in renal cell carcinoma

2024 | Fitzsimmons | NAR Cancer | Link

IGF2BP1 phosphorylation in the disordered linkers regulates ribonucleoprotein condensate formation and RNA metabolism

2024 | Hornegger | Nature Communications | Link

Unveiling the novel regulatory roles of RpoD-family sigma factors in Salmonella Typhimurium heat shock response through systems biology approaches

2024 | Park | PLOS Genetics | Link

Uncovering the small proteome of Methanosarcina mazei using Ribo-seq and peptidomics under different nitrogen conditions

2024 | Tufail | Nature Communications | Link

Impact of nutrient excess on physiology and metabolism of Sulfolobus acidocaldarius

2024 | Sedlmayr | Frontiers in Microbiology | Link

Assessing the de novo assemblers: a metaviromic study of apple and first report of citrus concave gum-associated virus, apple rubbery wood virus 1 and 2 infecting apple in India

2024 | Khan | BMC Genomics | Link

The RNA landscape of the human commensal Segatella copri reveals a small RNA essential for gut colonization

2024 | El mouali | Cell Host & Microbe | Link

The Neo-Open Reading Frame Peptides That Comprise the Tumor Framome Are a Rich Source of Neoantigens for Cancer Immunotherapy

2024 | Martin | Cancer Immunology Research | Link

Understanding the dissemination of viruses and viroids identified through virome analysis of major grapevine rootstocks and RPA-based detection of prevalent grapevine virus B

2024 | Thapa | Scientia Horticulturae | Link

piRNA generation is associated with the pioneer round of translation in stem cells

2024 | Parambil | Nucleic Acids Research | Link

Comprehensive map of ribosomal 2'O-methylation and C/D box snoRNAs in Drosophila melanogaster

2024 | Sklias | Nucleic Acids Research | Link

A kinetic dichotomy between mitochondrial and nuclear gene expression processes

2024 | Mcshane | Molecular Cell | Link

Universal microbial reworking of dissolved organic matter along environmental gradients

2024 | Freeman | Nature Communications | Link

Translation variation across genetic backgrounds reveals a post-transcriptional buffering signature in yeast

2024 | Teyssonniere | Nucleic Acids Research | Link

RNA-sequencing of paired tape-strips and skin biopsies in atopic dermatitis reveals key differences

2024 | Fritz | Allergy | Link

Mettl1-dependent m7G tRNA modification is essential for maintaining spermatogenesis and fertility in Drosophila melanogaster

2024 | Kaneko | Nature Communications | Link

Alternative translation initiation produces synaptic organizer proteoforms with distinct localization and functions

2024 | Lee | Molecular Cell | Link

A mycofactocin-associated dehydrogenase is essential for ethylene glycol metabolism by Rhodococcus jostii RHA1

2024 | Shimizu | Environmental Biotechnology | Link

Erythritol alters phosphotransferase gene expression and inhibits the in vitro growth of Staphylococcus coagulans isolated from canines with pyoderma

2024 | Onishi-sakamoto | Frontiers in Veterinary Science | Link

Systematic identification of post-transcriptional regulatory modules

2024 | M khoroshkin | Nature Communications | Link

mRNA cap-binding protein eIF4E1 is a novel regulator of Toxoplasma gondii latency

2024 | Holmes | mBio

Translational Regulation of Duplicated Gene Expression Evolution in Allopolyploid Cotton

2024 | Fu | Genes | Link

Dynamics of diversified A-to-I editing in Streptococcus pyogenes is governed by changes in mRNA stability

2024 | Wulff | Nucleic Acids Research | Link

Current limitations in predicting mRNA translation with deep learning models

2024 | Schlusser | Genome Biology | Link

Methyltransferase ATMETTL5 writes m6A on 18S ribosomal RNA to regulate translation in Arabidopsis

2024 | Song | New Phytologist | Link

Uridylation regulates mRNA decay directionality in fission yeast

2024 | Grochowski | Nature Communications | Link

Vaginal Lactobacillus fatty acid response mechanisms reveal a metabolite-targeted strategy for bacterial vaginosis treatment

2024 | Zhu | Cell | Link

Optimization of ribosome profiling in plants including structural analysis of rRNA fragments

2024 | Ting | Plant Methods | Link

Calibrated ribosome profiling assesses the dynamics of ribosomal flux on transcripts

2024 | Tomuro | Nature Communications | Link

m3C32 tRNA modification controls serine codon-biased mRNA translation, cell cycle, and DNA-damage response

2024 | Cui | Nature Communications

Detection of novel orthoparamyxoviruses, orthonairoviruses and an orthohepevirus in European white-toothed shrews

2024 | Haring | Microbial Genomics | Link

Transcriptome Analysis of Sake Yeast in Co-Culture with kuratsuki Kocuria

2024 | Kobayashi | MDPI Fermentation | Link

OsALKBH9-mediated m6 A demethylation regulates tapetal PCD and pollen exine accumulation in rice

2024 | Tang | Plant Biotechnology Journal | Link

Transcriptomic profiling of haloarchaeal denitrification through RNA-Seq analysis

2024 | Miralles-robledillo | Applied and Environmental Microbiology | Link

Widespread alterations in systemic immune profile are linked to lung function heterogeneity and airway microbes in cystic fibrosis

2024 | Rosii | Journal of Cystic Fibrosis | Link

Algal methylated compounds shorten the lag phase of Phaeobacter inhibens bacteria

2024 | Sperfeld | Nature Microbiology | Link

Selective gene expression maintains human tRNA anticodon pools during differentiation

2024 | Gao | Nature cell biology | Link

An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity

2024 | Ryan | Nature Microbiology | Link

Inhibition of mevalonate pathway by macrophage-specific delivery of atorvastatin prevents their pro-inflammatory polarisation

2024 | Krejcova | Insect Molecular Biology | Link

Chp1 is a dedicated chaperone at the ribosome that safeguards eEF1A biogenesis

2024 | Minoia | Nature Communications | Link

Cbp1 and Cren7 form chromatin-like structures that ensure efficient transcription of long CRISPR arrays

2024 | Blombach | Nature Communications | Link

Molecular and Serological Detection of Bovine Coronaviruses in Marmots (Marmota marmota) in the Alpine Region

2024 | Moreno | MDPI Viruses | Link

Biosynthesis and differential spatial distribution of the 3-deoxyanthocyanidins apigenidin and luteolinidin at the interface of a plant‐cyanobacteria symbiosis exposed to cold

2024 | Gungor | Plant, Cell & Environment | Link

TbsP and TrmB jointly regulate gapII to influence cell development phenotypes in the archaeon Haloferax volcanii

2024 | Hackley | Molecular Microbiology | Link

PABP-driven secondary condensed phase within RSV inclusion bodies activates viral mRNAs for ribosomal recruitment

2024 | Zhang | Virologica Sinica | Link

Impact of eIF2a phosphorylation on the translational landscape of mouse embryonic stem cells

2024 | Amiri | Cell Reports | Link

Genome analysis of viruses of Phenuiviridae, Betaflexiviridae and Bromoviridae, and apple scar skin viroid in pear by high-throughput sequencing revealing host expansion of a rubodvirus and an ilarvirus

2024 | Khan | Physiological and Molecular Plant Pathology | Link

Growth of the Nitrosomonas europaea cells in the biofilm and planktonic growth mode: Responses of extracellular polymeric substances production and transcriptome

2023 | Oshiki | Journal of Bioscience and Bioengineering | Link

Uncovering the temporal dynamics and regulatory networks of thermal stress response in a hyperthermophile using transcriptomics and proteomics

2023 | Gruenberger | mBio | Link

Methylated guanosine and uridine modifications in S. cerevisiae mRNAs modulate translation elongation

2023 | Jones | RSC Chemical Biology | Link

Paf1 complex subunit Rtf1 stimulates H2B ubiquitylation by interacting with the highly conserved N-terminal helix of Rad6

2023 | Fetian | PNAS | Link

Human mRNA in saliva can correctly identify individuals harboring acute infection

2023 | Yang | Host-Microbial Interactions | Link

Functioning of a tripartite lignocellulolytic microbial consortium cultivated under two shaking conditions: a metatranscriptomic study

2023 | Wang | Biotechnology for Biofuels and Bioproducts | Link

Bacteria use a catabolic patchwork pathway of apparently recent origin for degradation of the synthetic buffer compound TRIS

2023 | Holert | The ISME Journal | Link

A conserved transcription factor controls gluconeogenesis via distinct targets in hypersaline-adapted archaea with diverse metabolic capabilities

2023 | Hackley | PLOS Genetics | Link

Overexpression of polyphosphate polymerases and deletion of polyphosphate phosphatases shorten the replicative lifespan in yeast

2023 | Umeda | FEBS Letters | Link

Nuclear mRNPs are compact particles packaged with a network of proteins promoting RNA

2023 | Bonneau f | Genes Dev | Link

Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus

2023 | Van lopik | Nature Communications | Link

Stress-induced nuclear speckle reorganization is linked to activation of immediate early gene splicing

2023 | Sung | Journal of Cell Biology | Link

Revealing the small proteome of Haloferax volcanii by combining ribosome profiling and small-protein optimized mass spectrometry

2023 | Hadjeras | microLife | Link

Aerobic bacteria produce nitric oxide via denitrification and promote algal population collapse

2023 | Abada | The ISME Journal | Link

Characterization of an archaeal virus-host system reveals massive genomic rearrangements in a laboratory strain

2023 | Mercier | Frontiers in Microbiology | Link

Syntrophic entanglements for propionate and acetate oxidation under thermophilic and high-ammonia conditions

2023 | Singh | The ISME Journal | Link

Central Role of Sibling Small RNAs NgncR_162 and NgncR_163 in Main Metabolic Pathways of Neisseria gonorrhoeae

2023 | Steiner | mBio | Link

ROS-induced ribosome impairment underlies ZAKa mediated metabolic decline in obesity and aging

2023 | Snieckute | Science | Link

Macrophage‐derived insulin antagonist ImpL2 induces lipoprotein mobilization upon bacterial infection

2023 | Krejcova | EMBO | Link

Acclimation of Nodularia spumigena CCY9414 to inorganic phosphate limitation

2023 | Santoro | Frontiers in Microbiology | Link

Rational design of alcoholic fermentation targeting extracellular carbon

2023 | Watanabe | npj Science of Food | Link

Battle for control of anthocyanin biosynthesis in two Brassicaceae species infected with turnip mosaic virus

2023 | Inukai | Journal of Experimental Botany | Link

Integrated workflow for discovery of microprotein-coding small open reading frames

2023 | Cao | STAR Protocols | Link

Depletion of tRNA CCA-adding enzyme in Mycobacterium tuberculosis leads to polyadenylation of transcripts and precursor tRNAs

2023 | Blaszczyk | Scientific Reports | Link

RNF14-dependent atypical ubiquitylation promotes translation-coupled resolution of RNA-protein crosslinks

2023 | Zhao | Molecular Cell | Link

Mystery of fatal 'staggering disease' unravelled: novel rustrela virus causes severe meningoencephalomyelitis in domestic cats

2023 | Matiasek | Nature Communications | Link

Differential regulation of mRNA stability modulates transcriptional memory and facilitates environmental adaptation

2023 | Li | Nature Communications | Link

Unraveling the small proteome of the plant symbiont Sinorhizobium meliloti by ribosome profiling and proteogenomics

2023 | Hadjeras | uLife | Link

Identification of D-arabinan-degrading enzymes in mycobacteria

2023 | Al-jourani | Nature Communications | Link

Mechanisms of readthrough mitigation reveal principles of GCN1-mediated translational quality control

2023 | Mueller | Cell | Link

Transcriptome profiling of Nudix hydrolase gene deletions in the thermoacidophilic archaeon Sulfolobus acidocaldarius

2023 | Breuer | Frontiers in Microbiology | Link

Exploring engineered vesiculation by Pseudomonas putida KT2440 for natural product biosynthesis

2023 | Bitzenhofer | Microbial Biotechnology | Link

Benzene Amide Ether Scaffold is Active against Non-replicating and Intracellular Mycobacterium tuberculosis

2023 | Ahmed | ACS Infectious Diseases | Link

Coupling of co-transcriptional splicing and 3’ end Pol II pausing during termination in Arabidopsis

2023 | Zhou | Genome Biology | Link

Macrophage-derived insulin antagonist ImpL2 induces lipoprotein mobilization uponbacterial infection

2023 | Krejcova | EMBO | Link

Systematic discovery of neoepitope

2023 | Gurung | Nature Biotech | Link

The DEAD-box RNA helicase RhlB is required for efficient RNA processing at low temperature in Caulobacter

2023 | de Araujo | Microbiology Spectrum | Link

The carnitine degradation pathway of Acinetobacter baumannii and its role in virulence

2022 | Breisch | Environmental Microbiology | Link

Ribotype-dependent growth inhibition and promotion by erythritol in Cutibacterium acnes

2022 | Fujii | Journal of Cosmetic Dermatology | Link

The novel protein ScrA acts through the SaeRS two-component system to regulate virulence gene expression in Staphylococcus aureus

2022 | Wittekind | Molecular Microbiology | Link

Mechanisms behind the varying severity of Aleutian mink disease virus: Comparison of three farms with a different disease status

2022 | Virtanen | Veterinary Microbiology | Link

Global transcriptional and circadian regulation in a halotolerant cyanobacterium Halothece sp. PCC7418

2022 | Waditee-sirisattha | Scientific Reports | Link

Sex-specific variation in R-loop formation in Drosophila melanogaster

2022 | Stanek | PLOS Genetics | Link

A simple and robust method for isolating and analyzing chromatin-bound RNAs in Arabidopsis

2022 | Zhang | Plant Methods | Link

Opportunities and Challenges to Profile mRNA Modifications in Escherichia coli

2022 | Petrov | ChemBioChem | Link

Sensing of individual stalled 80S ribosomes by Fap1 for nonfunctional rRNA turnover

2022 | Li | Molecular Cell | Link

Metatranscriptomics of cheese microbial communities: Efficiency of RNA extraction from various cheese types and of mRNA enrichment

2022 | Carbonne | International Journal of Food Microbiology | Link

An atlas of plant full-length RNA reveals tissue-specific and monocots

2022 | Jia | Nature Plants | Link

Multi-site fungicides suppress banana Panama disease, caused by Fusarium oxysporum f. sp. cubense Tropical Race 4

2022 | Cannon | Plos Pathogens | Link

Characterization of an Entner-Doudoroff pathway-activated Escherichia coli

2022 | Kim | BMC Biotechnology for Biofuels and Bioproducts | Link

Translational readthrough of nonsense mutant TP53 by mRNA incorporation of 5-Fluorouridine

2022 | Palomar-Siles | Cell Death and Diseases | Link

Y RNAs are conserved endogenous RIG-I ligands across RNA virus infection and are targeted by HIV-1

2022 | Vabret | iScience | Link

Nanopore sequencing of RNA and cDNA molecules in Escherichia coli

2022 | Gruenberger | RNA | Link

Molecular Connectivity between Extracytoplasmic Sigma Factors and PhoP Accounts for Coupled Mycobacterial Stress Response

2022 | Goar | Journal of Bacteriology | Link

Comparative Analysis of rRNA Removal Methods for RNA-Seq Differential Expression in Halophilic Archaea

2022 | Martinez-Pastor | MDPI Biomolecules | Link

Disentangling the lipid divide: Identification of key enzymes for the biosynthesis of membrane-spanning and ether lipids in Bacteria

2022 | Sahonero-Canavesi | Science Advances | Link

Systematic identification of molecular mediators of interspecies sensing in a community of two frequently coinfecting bacterial pathogens

2022 | Zarrella | PLOS Biology | Link

Transcriptomic fingerprint of bacterial infection in lower extremity ulcers

2022 | Blaine | Journal of Pathology, Microbiology and Immunology | Link

Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing

2022 | Begik | Nature Methods | Link

Isolation of a virus causing a chronic infection in the archaeal model organism Haloferax volcanii reveals antiviral activities of a provirus

2022 | Alarcon-Schumacher | PNAS | Link

Non-target RNA depletion strategy to improve sensitivity of next-generation sequencing for the detection of RNA viruses in poultry

2022 | Parris | Journal of Veterinary Diagnostic Investigation | Link

The Mammalian Cap-Specific m6Am RNA Methyltransferase PCIF1 Regulates Transcript Levels in Mouse Tissues

2022 | Pandey | Cell Reports | Link

Enhancer transcription detected in the nascent transcriptomic landscape of bread wheat

2022 | Xie | Genome Biology | Link

Dual functioning by the PhoR sensor is a key determinant to Mycobacterium tuberculosis virulence

2021 | Singh | PLOS Genetics | Link

A Cas12a-based CRISPR interference system for multigene regulation in mycobacteria

2021 | Fleck | Journal of Biological Chemistry | Link

Compensatory evolution of Pseudomonas aeruginosa

2021 | La rosa | Nature Communications | Link

A versatile genetic toolbox for Prevotella copri enables studying polysaccharide utilization systems

2021 | Li | EMBO | Link

Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

2021 | Mo | Genome Biology | Link

Revealing nascent RNA processing dynamics with nano-COP

2021 | Drexler | Nature Protocols | Link

Neuronal Nsun2 deficiency produces tRNA epitranscriptomic alterations and proteomic shifts impacting synaptic signaling and behavior

2021 | Blaze | Nature Communications | Link

Cotranscriptional and Posttranscriptional Features of the Transcriptome in Soybean Shoot Apex and Leaf

2021 | Zhu | Frontiers in Plant Science | Link

Enhanced production of nonanedioic acid from nonanoic acid by engineered

2021 | Lee | Biotechnology Journal | Link

Experimental and Computational Workflow for RNA Sequencing in Mycobacterium tuberculosis : From Total RNA to Differentially Expressed Genes

2021 | Ma | Mycobacteria Protocols | Link

Quasi-essentiality of RNase Y in Bacillus subtilis is caused by its critical role in the control of mRNA homeostasis

2021 | Benda | Nucleic Acids Research | Link

Cysteine: an overlooked energy and carbon source

2021 | Goebbels | Scientific Reports | Link

Chromosome-level genome assembly and transcriptome-based annotation of the oleaginous yeast Rhodotorula toruloides CBS 14

2021 | Martin-hernandez | Genomics | Link

Identification of small molecules that interfere with c-di-GMP signaling and induce dispersal of Pseudomonas aeruginosa biofilms

2021 | Andersen | Npj biofilms and microbiomes | Link

Discerning the role of a functional arsenic-resistance cassette in the evolution and adaptation of a rice pathogen

2021 | Kaur | Microbial Genomics | Link

Towards the characterization of the hidden world of small proteins in Staphylococcus aureus, a proteogenomics approach

2021 | Fuchs | PLOS Genetics | Link

smORFer: a modular algorithm to detect small ORFs in prokaryotes.

2021 | Bartholomaus | Nucleic Acids Research | Link

The de novo Purine Biosynthesis Pathway Is the Only Commonly Regulated Cellular Pathway during Biofilm Formation in TSB-Based Medium in Staphylococcus aureus and Enterococcus faecalis

2021 | Gelinas | Microbiology Spectrum | Link

Channel nuclear pore complex subunits are required for transposon silencing in Drosophila

2021 | Munafo | eLife | Link

FLEP-seq simultaneous detection of RNA polymerase II position, splicing status, polyadenylation site and poly(A) tail length at genome-wide scale by single-molecule nascent RNA sequencing

2021 | Long | Nature Protocols | Link

A transposon expression burst accompanies the activation of Y-chromosome fertility genes during Drosophila spermatogenesis

2021 | Lawlor | Nature Communications | Link

A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence

2020 | Venturini | microLife | Link

A high-resolution transcriptome map identifies small RNA regulation of metabolism in the gut microbe Bacteroides thetaiotaomicron

2020 | Ryan | Nature Communications | Link

Bifidobacterium infantis Metabolizes 2'Fucosyllactose-Derived and Free Fucose Through a Common Catabolic Pathway Resulting in 1,2-Propanediol Secretion

2020 | Dedon | Frontiers in Nutrition | Link

Coxiella burnetii replicates in Galleria mellonella hemocytes and transcriptome mapping reveals in vivo regulated genes

2020 | Kovacs-simon | Virulence | Link

Phenotypic and Transcriptomic Analyses of Seven Clinical Stenotrophomonas maltophilia Isolates Identify a Small Set of Shared and Commonly Regulated Genes Involved in the Biofilm Lifestyle

2020 | Alio | Applied and Environmental Microbiology | Link

Deconstructing and Reconstructing Cheese Rind Microbiomes for Experiments in Microbial Ecology and Evolution

2019 | Cosetta | Current Protocols in Microbiology | Link


▒ siRNA Pool [siPOOL] 사용 논문

 

Cyclophilin D plays a critical role in the survival of senescent cells

2024 | Protasoni | EMBO | Link

Proteomic profiling reveals CEACAM6 function in driving gallbladder cancer aggressiveness through integrin receptor, PRKCD and AKT/ERK signaling

2024 | Sugiyanto | Cell Death and Diseases | Link

N-terminal domain of polypyrimidine-tract binding protein is a dynamic folding platform for adaptive RNA recognition

2024 | Damberger | Nucleic Acids Research | Link

Release of mitochondrial dsRNA into the cytosol is a key driver of the inflammatory phenotype of senescent cells

2024 | Lopez-polo | Nature Communications | Link

Exploring the neuroprotective potential of Nrf2-pathway activators against annonacin toxicity

2024 | Costa | Scientific Reports | Link

Splicing control by PHF5A is crucial for melanoma cell survival

2024 | Meissgeier | Cell Proliferation | Link

HSF1 is a prognostic determinant and therapeutic target in intrahepatic cholangiocarcinoma

2024 | Cigliano | J Exp Clin Cancer Res | Link

Cilia defects upon loss of WDR4 are linked to proteasomal hyperactivity and ubiquitin shortage

2024 | Burkhalter | Cell Death and Diseases | Link

Chromosome 8p engineering reveals increased metastatic potential targetable by patient-specific synthetic lethality in liver cancer

2024 | Huth | Science Advances | Link

BLM and BRCA1-BARD1 coordinate complementary mechanisms of joint DNA molecule resolution

2024 | Tsukada | Molecular Cell | Link

Ribosomal protein L24 mediates mammalian microRNA processing in an evolutionarily conserved manner

2024 | Tzur | Cellular and Molecular Life Sciences | Link

CSDE1 Intracellular Distribution as a Biomarker of Melanoma Prognosis

2024 | Indacochea | MDPI Cancers | Link

Evoked Weibel-Palade Body Exocytosis Modifies the Endothelial Cell Surface by Releasing a Substrate-Selective Phosphodiesterase

2024 | Na | Advance Science | Link

PPARG activation promotes the proliferation of colorectal cancer cell lines and enhances the antiproliferative effect of 5-fluorouracil

2024 | Sch | BMC Cancer | Link

Alternative Wnt-signaling axis leads to a break of oncogene-induced senescence

2024 | Kluge | Cell Death and Diseases | Link

lncRNA LINC00941 modulates MTA2/NuRD occupancy to suppress premature human epidermal differentiation

2024 | Morgenstern | Life Science Alliance | Link

NRN1 interacts with Notch to increase oncogenic STAT3 signaling in melanoma

2024 | Devitt | Cell Communication and Signaling | Link

Basis of gene-specific transcription regulation by the Integrator complex

2024 | Sabath | Molecular Cell | Link

Plakophilin 4 controls the spatio-temporal activity of RhoA at adherens junctions to promote cortical actin ring formation and tissue tension

2024 | M | Cellular and Molecular Life Sciences | Link

Dengue virus NS1 secretion is regulated via importin-subunit β1 controlling expression of the chaperone GRp78 and targeted by the clinical drug ivermectin

2023 | Denolly | mBio | Link

Prion protein conversion at two distinct cellular sites precedes fibrillisation

2023 | Ribes | Nature Communications | Link

Ethanol induces replication fork stalling and membrane stress in immortalized laryngeal cells

2023 | Hoes | iScience | Link

Identification of DUSP4/6 overexpression as a potential rheostat to NRAS-induced hepatocarcinogenesis

2023 | Klemm | BMC Cancer | Link

The function of ER-phagy receptors is regulated through phosphorylation-dependent ubiquitination pathways

2023 | Berkane | Nature Communications | Link

Fast proliferating and slowly migrating non-small cell lung cancer cells are vulnerable to decitabine and retinoic acid combinatorial treatment

2023 | Pelos | International Journal of Cancer | Link

GTPase activating protein DLC1 spatio-temporally regulates Rho signaling

2023 | Heydasch | eLife | Link

Expression of Bone Morphogenetic Protein 14 in Liver Disease and Cancer

2023 | Sommer | MDPI Livers | Link

Polarity signaling balances epithelial contractility and mechanical resistance

2023 | R | Scientific Reports | Link

Cryptosporidium uses CSpV1 to activate host type I interferon and attenuate antiparasitic defenses

2023 | Deng | Nature Communications | Link

Cold Atmospheric Plasma Triggers Apoptosis via the Unfolded Protein Response in Melanoma Cells

2023 | Zimmermann | MDPI Cancers | Link

MIA/CD-RAP Regulates MMP13 and Is a Potential New Disease-Modifying Target for Osteoarthritis Therapy

2023 | Staebler | MDPI Cells | Link

Genome-wide RNAi screen identifies novel players in human 60S subunit biogenesis including key enzymes of polyamine metabolism

2022 | D | Nucleic Acids Research | Link

The HHIP-AS1 lncRNA promotes tumorigenicity through stabilization of dynein complex 1 in human SHH-driven tumors

2022 | Bartl | Nature Communications | Link

The Interplay of NEAT1 and miR-339-5p Influences on Mesangial Gene Expression and Function in Various Diabetic-Associated Injury Models

2022 | Reichelt-wurm | MDPI non-coding RNA | Link

Melanoma RBPome identification reveals PDIA6 as an unconventional RNA-binding protein involved in metastasis

2022 | Mestre-farr | Nucleic Acids Research | Link

Optogenetic actuator

2022 | Dessauges | Molecular systems biology | Link

Knockdown of the stem cell marker Musashi-1 inhibits endometrial cancer growth and sensitizes cells to radiation

2022 | Falke | Stem Cell Research & Therapy | Link

DUSP4 protects BRAF- and NRAS-mutant melanoma from oncogene overdose through modulation of MITF

2022 | Gutierrez-prat | Life Science Alliance | Link

A JAM-A

2022 | Kummer | Journal of Cell Biology | Link

Transcriptomic landscapes of SARS-CoV-2-infected and bystander lung cells reveal a selective upregulation of NF-κB-dependent coding and non-coding proviral transcripts

2022 | Szachnowski | bioRxiv | Link

Eukaryotic translation initiation factor 4E binding protein 1 (EIF4EBP1) expression in glioblastoma is driven by ETS1- and MYBL2-dependent transcriptional activation

2022 | Hauffe | Cell Death Discovery | Link

Noncanonical Function of AGO2 Augments T-cell Receptor Signaling in T-cell Prolymphocytic Leukemia

2022 | Braun | AACR Journals | Link

Angpt2/Tie2autostimulatory loopcontrols tumorigenesis

2022 | Karabid | EMBO Molecular Medicine | Link

2022 | Li | Research Square | Link

JAM-A interacts with α3β1 integrin and tetraspanins CD151 and CD9 to regulate collective cell migration of polarized epithelial cells

2022 | Th | Cellular and Molecular Life Sciences | Link

Ago-RIP Sequencing Identifies New MicroRNA-449a-5p Target Genes Increasing Sorafenib Efficacy in Hepatocellular Carcinoma

2022 | Reinkens | Journal of Cancer | Link

Probing protein ubiquitination in live cells

2022 | Qin | bioRxiv | Link

USP32-regulated LAMTOR1 ubiquitination impacts mTORC1 activation and autophagy induction

2022 | Hertel | Cell Reports | Link

High-throughput morphometric and transcriptomicprofiling uncovers composition of naıve andsensory-deprived cortical cholinergicVIP/CHAT neurons

2022 | Yayon | EMBO | Link

Screening of the siGPCR library in combination with cisplatin against lung cancers

2022 | Kim | Scientific Reports | Link

SNAP23-Mediated Perturbation of Cholesterol-Enriched Membrane Microdomain Promotes Extracellular Vesicle Production in Src-Activated Cancer Cells

2022 | Mitani | Biological and Pharmaceutical Bulletin | Link

Primary cilia contribute to the aggressiveness of atypical teratoid/rhabdoid tumors

2022 | Bl | Cell Death and Diseases | Link

The lysosomal proteome of senescent cells contributes to the senescence secretome

2022 | Rovira | Aging Cell | Link

Targeting the Retinoblastoma/E2F repressive complex by CDK4/6 inhibitors amplifies oncolytic potency of an oncolytic adenovirus

2022 | Koch | Nature Communications | Link

Global and precise identification of functionalmiRNA targets in mESCs by integrative analysis

2022 | Schaefer | EMBO reports | Link

YB-1 Oncoprotein Controls PI3K/Akt Pathway by Reducing Pten Protein Level

2021 | Delicato | MDPI genes | Link

Hepsin regulates TGFbsignaling via fibronectinproteolysis

2021 | Belitskin | EMBO reports | Link

AHNAK controls 53BP1-mediated p53 response by restraining 53BP1 oligomerization and phase separation

2021 | Ghodke | Cell Press | Link

Identification of novel targets of miR-622 in hepatocellular carcinoma reveals common regulation of cooperating genes and outlines the oncogenic role of zinc finger CCHC-type containing 11

2021 | Gaza | Neoplasia | Link

Cold-inducible RNA binding protein promotes breast cancer cell malignancy by regulating Cystatin C levels

2021 | Ibdacochea | RNA | Link

Endosomal membrane tension regulates ESCRT-III-dependent intra-lumenal vesicle formation

2020 | Mercier | Nature cell biology | Link

Prevention of dsRNA-induced interferon signalingby AGO1x is linked to breast cancer cellproliferation

2020 | Ghosh | EMBO | Link

The lncRNA lincNMR regulates nucleotide metabolism via a YBX1 - RRM2 axis in cancer

2020 | Gandhi | Nature Communications | Link

MICOS assembly controls mitochondrial innermembrane remodeling and crista junctionredistribution to mediate cristae formation

2020 | Stephan | EMBO | Link

HuRdling Senescence: HuR Breaks BRAF-Induced Senescence in Melanocytes and Supports Melanoma Growth

2020 | Liebig | MDPI Cancers | Link

The UPR sensor IRE1a and the adenovirus E3-19K glycoprotein sustain persistent and lytic infections

2020 | Prasad | Nature Communications | Link

Oncogenic hijacking of a developmental transcription factor evokes vulnerability toward oxidative stress in Ewing sarcoma

2020 | Marchetto | Nature Communications | Link

ALIX- and ESCRT-III

2020 | Larios | Journal of Cell Biology | Link

Bone Morphogenetic Protein-8B Expression is Induced in Steatotic Hepatocytes and Promotes Hepatic Steatosis and Inflammation In Vitro

2019 | Mahli | MDPI Cells | Link

Restricting Glycolysis Preserves T Cell Effector Functions and Augments Checkpoint Therapy

2019 | Renner | Cell Reports | Link

MRTF-A controls myofbroblastic diferentiation of human multipotent stromal cells and their tumour-supporting function in xenograft models

2019 | Werner | Nature Scientific reports | Link

C-Jun drives melanoma progression in PTEN wild type melanoma cells

2019 | Kappelmann-fenzl | Cell Death and Diseases | Link

NEAT1 is overexpressed in Parkinson

2019 | Simchovitz | The FASEB Journal | Link

The Delta Subunit of Rod-Specific Photoreceptor cGMP Phosphodiesterase (PDE6D) Contributes to Hepatocellular Carcinoma Progression

2019 | Dietrich | MDPI Cancers | Link

Role of MIA (melanoma inhibitory activity) in melanocyte senescence

2019 | Feuerer | Pigment Cell & Melanoma | Link

Binary Targeting of siRNA to Hematologic Cancer Cells In Vivo Using Layer-by-Layer Nanoparticles

2019 | Choi | Advanced Funtional Materials | Link

53BP1 nuclear bodies enforce replication timing at under-replicated DNA to limit heritable DNA damage

2019 | Spies | Nature cell biology | Link

Neuroblastoma RAS Viral Oncogene Homolog (NRAS) Is a Novel Prognostic Marker and Contributes to Sorafenib Resistance in Hepatocellular Carcinoma

2019 | Dietrich | Neoplasia | Link

Inhibition of peptidyl-prolyl isomerase (PIN1) and BRAF signaling to target melanoma

2018 | Braun | American Journal of Translational Research | Link

The long non-coding RNA LINC00941andSPRR5are novel regulators of humanepidermal homeostasis

2018 | Ziegler | EMBO reports | Link

SAMMSON fosters cancer cell fitness by concertedly enhancing mitochondrial and cytosolic translation

2018 | Vendramin | Nature Structural and Molecular Biology | Link

Multi-level Proteomics Identifies CT45 as a Chemosensitivity Mediator and Immunotherapy Target in Ovarian Cancer

2018 | Coscia | Cell | Link

FKBP51 modulates steroid sensitivity and NFκBsignalling: A novel anti-inflammatory drug target

2018 | K | European Journal of Immunology | Link

Epigenome-wide DNA methylation profiling in Progressive Supranuclear Palsy reveals major changes at DLX1

2018 | Weber | Nature Communications | Link

Transition of responsive mechanosensitive elements from focal adhesions to adherens junctions on epithelial differentiation

2018 | Noethel | MBoC | Link

Nrf2 protects stellate cells from Smad-dependent cell activation

2018 | Prestigiacomo | PLOS ONE | Link

Novel short isoforms of adenylyl cyclase as negative regulators of cAMP production

2018 | Vallin | BBA Molecular Cell Research | Link

14-3-3 proteins regulate desmosomal adhesion via plakophilins

2018 | Rietscher | The Company of Biologist | Link

Genome-Scale Signatures of Gene Interaction from Compound Screens Predict Clinical Efficacy of Targeted Cancer Therapies

2018 | Jiang | Cell Systems | Link

Cervical cancer is addicted to SIRT1 disarming the AIM2 antiviral defense

2018 | So | Oncogene | Link

The Long Noncoding RNA Cancer Susceptibility 9 and RNA Binding Protein Heterogeneous Nuclear Ribonucleoprotein L Form a Complex and Coregulate Genes Linked to AKT Signaling

2018 | Klingenberg | Hepatology | Link

The cancer-associated microprotein CASIMO1 controls cell proliferation and interacts with squalene epoxidase modulating lipid droplet formation

2018 | Polycarpu-schwarz | Oncogene | Link

CD74 regulates complexity of tumor cell HLA class II peptidome in brain metastasis and is a positive prognostic marker for patient survival

2018 | Zeiner | Acta Neuropathologica Communications | Link

Lithium chloride effectively kills the honey bee parasite Varroa destructor by a systemic mode of action

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Challenges of CRISPR/Cas9 applications for long non-coding RNA genes

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BMP6-induced modulation of the tumor micro-milieu

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Wild-type KRAS is a novel therapeutic target for melanoma contributing to primary and acquired resistance to BRAF inhibition

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Effects of soluble CPE on glioma cell migration are associated with mTOR activation and enhanced glucose flux

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A cautionary tale of sense-antisense gene pairs: independent regulation despite inverse correlation of expression

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ERAP1 overexpression in HPV-induced malignancies: A possible novel immuneevasion mechanism

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Enhanced Stem Cell Differentiation and Immunopurification of Genome Engineered Human Retinal Ganglion Cells

2017 | Sluch | Stem Cell Research & Therapy | Link

Carboxypeptidase E transmits its anti-migratory function in glioma cells via transcriptional regulation of cell architecture and motility regulating factors

2017 | Armento | International Journal of Cancer | Link

The long non-coding RNA LINC00152 is essential for cell cycle progression through mitosis in HeLa cells

2017 | N | Scientific Reports | Link

A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis

2017 | Treiber | Molecular Cell | Link

Enhanced Functional Genomic Screening Identifies Novel Mediators of Dual Leucine Zipper KinaseDependent Injury Signaling in Neurons

2017 | Welsbie | Neuron | Link

The lncRNA VELUCT strongly regulates viability of lung cancer cells despite its extremely low abundance

2017 | Seiler | Nucleic Acids Research | Link

Host AMPK Is a Modulator of Plasmodium Liver Infection

2016 | Ruivo | Cell Reports | Link

Induction of exportin-5 expression during melanoma development supports the cellular behavior of human malignant melanoma cells

2016 | Ott | Oncotarget | Link

Slug Is Increased in Vascular Remodeling and Induces a Smooth Muscle Cell Proliferative Phenotype

2016 | Coll-bonfill | PLOS ONE | Link

p53 induces formation of NEAT1 lncRNA-containing paraspeckles that modulate replication stress response and chemosensitivity

2016 | Adriaens | Nature Medicine | Link

SOX5 is involved in balanced MITF regulation in human melanoma cells

2016 | Korda | BMC Medical Genomics | Link

Biochemical isolation of Argonaute protein complexes by Ago-APP Judith Hauptmanna , Daniel Sch

2015 | Hauptmann | PNAS | Link

The stellate vascular smooth muscle cell phenotype is induced by IL-1β via the secretion of PGE2 and subsequent cAMP-dependent protein kinase A activation

2015 | Blirando | BBA Molecular Cell Research | Link

JAM-A regulates cortical dynein localization through Cdc42 to control planar spindle orientation during mitosis

2015 | Tuncay | Nature Communications | Link

Importin- facilitates nuclear import of human GW proteins and balances cytoplasmic gene silencing protein levels

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Chemical Induction of Unfolded Protein Response Enhances Cancer Cell Killing through Lytic Virus Infection

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Advances in RNAi Tools and Technologies

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